Myroides odoratimimus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Myroides; s__Myroides odoratimimus
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Myroides; s__Myroides odoratimimus
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Myroides; s__Myroides odoratimimus; x__Myroides odoratimimus CIP 101113
NCBI Strain Identifiers CIP 101113
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001485415.1)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 2
tRNA Count 20
Contig Count 59
N50 Contigs 140,098 bp
Longest Contig 461,824 bp
Scaffold Count 3
N50 Scaffolds 2,491,923 bp
Longest Scaffold 2,491,923 bp
Genome Size 4,138,659 bp
Protein Count 3,626
Coding Density 85.02%
GC Percentage 33.97%
Ambiguous Bases N/A
GTDB representative GCA_001485415.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Myro_odor_CIP_101113_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463911
Country None
Date 2012-1-11
Genbank Assembly Accession GCA_000242135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 3,590
Refseq Category na
Seq Rel Date 2012/01/11
Spanned Gaps 56
Species Taxid 76832
SSU Count 3
Submitter Broad Institute
Taxid 883154
Total Gap Length 46368
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGEE00000000.1