Corynebacterium pseudotuberculosis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium pseudotuberculosis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium pseudotuberculosis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium pseudotuberculosis; x__Corynebacterium pseudotuberculosis 3/99-5
NCBI Strain Identifiers 99-5;3;3/99-5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002155265.1)
Genome Characteristics
CheckM Completeness 99.56%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 2,337,938 bp
Longest Contig 2,337,938 bp
Scaffold Count 1
N50 Scaffolds 2,337,938 bp
Longest Scaffold 2,337,938 bp
Genome Size 2,337,938 bp
Protein Count 2,141
Coding Density 88.16%
GC Percentage 52.18%
Ambiguous Bases N/A
GTDB representative GCA_002155265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM24185v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603750
Country United Kingdom: Scotland
Date 2012-1-10
Genbank Assembly Accession GCA_000241855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source naturally-occurring caseous lymphadenitis
Latitude Longitude None
Molecule Count 1
CDS Count 2,080
Refseq Category na
Seq Rel Date 2012/01/10
Spanned Gaps 0
Species Taxid 1719
SSU Count 4
Submitter Rede Paraense de Genomica e Proteomica
Taxid 1087452
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None