Pseudoalteromonas marina
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas marina
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas sp. BSi20480
NCBI Strain Identifiers BSi20480
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000238335.3)
Genome Characteristics
CheckM Completeness 99.62%
CheckM Contamination 0.51%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 201
N50 Contigs 48,010 bp
Longest Contig 235,083 bp
Scaffold Count 201
N50 Scaffolds 48,010 bp
Longest Scaffold 235,083 bp
Genome Size 4,149,214 bp
Protein Count 3,917
Coding Density 88.98%
GC Percentage 39.60%
Ambiguous Bases N/A
GTDB representative GCA_000238335.3
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name PspBSi20480_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00036593
Country None
Date 2011-11-25
Genbank Assembly Accession GCA_000241365.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,736
Refseq Category na
Seq Rel Date 2011/11/25
Spanned Gaps 0
Species Taxid 386428
SSU Count 3
Submitter Shandong University
Taxid 386428
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BADX00000000.1