Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus; x__Staphylococcus aureus subsp. aureus 21232
NCBI Strain Identifiers 21232
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 53
N50 Contigs 109,166 bp
Longest Contig 282,330 bp
Scaffold Count 53
N50 Scaffolds 109,166 bp
Longest Scaffold 282,330 bp
Genome Size 2,758,530 bp
Protein Count 2,560
Coding Density 84.04%
GC Percentage 32.63%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM23961v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00116881
Country None
Date 2011-12-22
Genbank Assembly Accession GCA_000239615.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,770
Refseq Category na
Seq Rel Date 2011/12/22
Spanned Gaps 0
Species Taxid 1280
SSU Count 3
Submitter J. Craig Venter Institute
Taxid 904737
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGTY00000000.1