Flavonifractor plautii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Oscillospirales; f__Oscillospiraceae; g__Flavonifractor; s__Flavonifractor plautii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Flavonifractor; s__Flavonifractor plautii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Ruminococcaceae; g__Flavonifractor; s__Flavonifractor plautii; x__Flavonifractor plautii ATCC 29863
NCBI Strain Identifiers ATCC 29863
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (11 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 344
N50 Contigs 19,607 bp
Longest Contig 70,417 bp
Scaffold Count 242
N50 Scaffolds 31,212 bp
Longest Scaffold 87,117 bp
Genome Size 3,820,124 bp
Protein Count 3,755
Coding Density 87.53%
GC Percentage 61.07%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM23929v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00627089
Country None
Date 2011-12-21
Genbank Assembly Accession GCA_000239295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gut
Latitude Longitude None
Molecule Count N/A
CDS Count 3,747
Refseq Category na
Seq Rel Date 2011/12/21
Spanned Gaps 102
Species Taxid 292800
SSU Count 1
Submitter Washington University Genome Sequencing Center
Taxid 411475
Total Gap Length 6525
Translation Table 11
tRNA Count (total) 54
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AGCK00000000.1