Coprobacter fastidiosus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Coprobacteraceae; g__Coprobacter; s__Coprobacter fastidiosus
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Tannerellaceae; g__Tannerella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Tannerellaceae; g__Tannerella; s__Tannerella sp. 6_1_58FAA_CT1
NCBI Strain Identifiers 6_1_58FAA_CT1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000473955.1)
Genome Characteristics
CheckM Completeness 99.62%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 7
23S Count 9
tRNA Count 20
Contig Count 89
N50 Contigs 108,758 bp
Longest Contig 224,324 bp
Scaffold Count 32
N50 Scaffolds 694,335 bp
Longest Scaffold 1,024,172 bp
Genome Size 3,867,973 bp
Protein Count 3,176
Coding Density 88.19%
GC Percentage 39.68%
Ambiguous Bases 3
GTDB representative GCA_000473955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Tannerella_sp_6_1_58FAA_CT1_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463805
Country None
Date 2011-12-20
Genbank Assembly Accession GCA_000238695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gastrointestinal tract
Latitude Longitude None
Molecule Count N/A
CDS Count 3,170
Refseq Category na
Seq Rel Date 2011/12/20
Spanned Gaps 57
Species Taxid 665949
SSU Count 7
Submitter Broad Institute
Taxid 665949
Total Gap Length 24540
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACWX00000000.1