Pseudoalteromonas citrea
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas citrea
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas citrea
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas citrea; x__Pseudoalteromonas citrea DSM 8771
NCBI Strain Identifiers NCIMB 1889
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 223
N50 Contigs 78,132 bp
Longest Contig 330,781 bp
Scaffold Count 223
N50 Scaffolds 78,132 bp
Longest Scaffold 330,781 bp
Genome Size 5,320,014 bp
Protein Count 4,550
Coding Density 88.54%
GC Percentage 41.12%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Pcit_2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470923
Country None
Date 2013-09-06
Genbank Assembly Accession GCA_000238375.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,487
Refseq Category representative genome
Seq Rel Date 2013/09/06
Spanned Gaps 0
Species Taxid 43655
SSU Count 1
Submitter Shandong University
Taxid 1117314
Total Gap Length 0
Translation Table 11
tRNA Count (total) 96
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AHBZ00000000.2