Pseudoalteromonas undina
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas undina
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas undina
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas undina; x__Pseudoalteromonas undina DSM 6065
NCBI Strain Identifiers NCIMB 2128
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (9 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 49
N50 Contigs 218,104 bp
Longest Contig 764,397 bp
Scaffold Count 49
N50 Scaffolds 218,104 bp
Longest Scaffold 764,397 bp
Genome Size 3,998,432 bp
Protein Count 3,580
Coding Density 89.21%
GC Percentage 39.94%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Pund_2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470920
Country None
Date 2013-09-06
Genbank Assembly Accession GCA_000238275.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,580
Refseq Category na
Seq Rel Date 2013/09/06
Spanned Gaps 0
Species Taxid 43660
SSU Count 1
Submitter Shandong University
Taxid 1117320
Total Gap Length 0
Translation Table 11
tRNA Count (total) 87
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AHCF00000000.2