Pediococcus claussenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Pediococcus; s__Pediococcus claussenii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Pediococcus; s__Pediococcus claussenii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Pediococcus; s__Pediococcus claussenii; x__Pediococcus claussenii ATCC BAA-344
NCBI Strain Identifiers ATCC BAA-344
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.84%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 9
N50 Contigs 1,829,111 bp
Longest Contig 1,829,111 bp
Scaffold Count 9
N50 Scaffolds 1,829,111 bp
Longest Scaffold 1,829,111 bp
Genome Size 1,978,793 bp
Protein Count 1,897
Coding Density 87.16%
GC Percentage 37.02%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM23799v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02604240
Country None
Date 2012-3-15
Genbank Assembly Accession GCA_000237995.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 9
CDS Count 1,882
Refseq Category representative genome
Seq Rel Date 2012/03/15
Spanned Gaps 0
Species Taxid 187452
SSU Count 4
Submitter University of Saskatchewan
Taxid 701521
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None