Lactococcus garvieae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus garvieae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus garvieae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus garvieae; x__Lactococcus garvieae LG9
NCBI Strain Identifiers LG9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000269925.1)
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 1.53%
CheckM Strain Heterogeneity 20.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 139
N50 Contigs 34,588 bp
Longest Contig 101,687 bp
Scaffold Count 139
N50 Scaffolds 34,588 bp
Longest Scaffold 101,687 bp
Genome Size 2,082,269 bp
Protein Count 2,125
Coding Density 88.37%
GC Percentage 38.53%
Ambiguous Bases N/A
GTDB representative GCA_000269925.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name LgarvieLg9_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471888
Country Italy
Date 2011-12-1
Genbank Assembly Accession GCA_000236535.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,103
Refseq Category na
Seq Rel Date 2011/12/01
Spanned Gaps 0
Species Taxid 1363
SSU Count 1
Submitter University of Milan-Department of Food Science and Microbiology
Taxid 1091039
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGQY00000000.1