Aeromonas salmonicida
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida; x__Aeromonas salmonicida subsp. salmonicida 01-B526
NCBI Strain Identifiers 01-B526
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 356
23S Count 1
tRNA Count 19
Contig Count 604
N50 Contigs 83,743 bp
Longest Contig 316,369 bp
Scaffold Count 604
N50 Scaffolds 83,743 bp
Longest Scaffold 316,369 bp
Genome Size 4,927,927 bp
Protein Count 4,846
Coding Density 85.16%
GC Percentage 58.34%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM23484v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469939
Country None
Date 2011-11-10
Genbank Assembly Accession GCA_000234845.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,580
Refseq Category na
Seq Rel Date 2011/11/10
Spanned Gaps 0
Species Taxid 645
SSU Count 333
Submitter IBIS, Université Laval
Taxid 1076135
Total Gap Length 0
Translation Table 11
tRNA Count (total) 88
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGVO00000000.1