Alloprevotella rava
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Alloprevotella; s__Alloprevotella rava
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Alloprevotella; s__Alloprevotella rava
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Alloprevotella; s__Alloprevotella rava; x__Alloprevotella rava F0323
NCBI Strain Identifiers F0323
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.16%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 57
N50 Contigs 100,410 bp
Longest Contig 275,031 bp
Scaffold Count 30
N50 Scaffolds 339,760 bp
Longest Scaffold 607,231 bp
Genome Size 2,593,873 bp
Protein Count 2,142
Coding Density 86.30%
GC Percentage 45.49%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Prevotella_sp_F0323_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02463812
Country None
Date 2011-11-8
Genbank Assembly Accession GCA_000234115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 2,107
Refseq Category representative genome
Seq Rel Date 2011/11/08
Spanned Gaps 27
Species Taxid 671218
SSU Count 3
Submitter Broad Institute
Taxid 679199
Total Gap Length 5303
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACZK00000000.1