Thermovirga lienii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Synergistota; c__Synergistia; o__Synergistales; f__Thermovirgaceae; g__Thermovirga; s__Thermovirga lienii
Filtered NCBI Taxonomy d__Bacteria; p__Synergistetes; c__Synergistia; o__Synergistales; f__Synergistaceae; g__Thermovirga; s__Thermovirga lienii
Unfiltered NCBI Taxonomy d__Bacteria; p__Synergistetes; c__Synergistia; o__Synergistales; f__Synergistaceae; g__Thermovirga; s__Thermovirga lienii; x__Thermovirga lienii DSM 17291
NCBI Strain Identifiers DSM 17291
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 2
N50 Contigs 1,967,774 bp
Longest Contig 1,967,774 bp
Scaffold Count 2
N50 Scaffolds 1,967,774 bp
Longest Scaffold 1,967,774 bp
Genome Size 1,999,646 bp
Protein Count 1,941
Coding Density 92.50%
GC Percentage 47.06%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM23377v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02232060
Country Norway
Date 2011-11-3
Genbank Assembly Accession GCA_000233775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source production water from an oil well
Latitude Longitude None
Molecule Count 2
CDS Count 1,905
Refseq Category representative genome
Seq Rel Date 2011/11/03
Spanned Gaps 0
Species Taxid 336261
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 580340
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None