Streptococcus suis_P
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis_P
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis; x__Streptococcus suis R61
NCBI Strain Identifiers R61
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002831545.1)
Genome Characteristics
CheckM Completeness 98.88%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 100.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 53
N50 Contigs 97,080 bp
Longest Contig 473,728 bp
Scaffold Count 53
N50 Scaffolds 97,080 bp
Longest Scaffold 473,728 bp
Genome Size 2,390,914 bp
Protein Count 2,330
Coding Density 86.97%
GC Percentage 41.16%
Ambiguous Bases 14
GTDB representative GCA_002831545.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM23132v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469902
Country None
Date 2011-10-21
Genbank Assembly Accession GCA_000231325.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,384
Refseq Category na
Seq Rel Date 2011/10/21
Spanned Gaps 0
Species Taxid 1307
SSU Count 3
Submitter Huazhong Agricultural University
Taxid 996306
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEYY00000000.1