Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae; x__Streptococcus pneumoniae 1974M1-LZD
NCBI Strain Identifiers 1974M1-LZD
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457635.1)
Genome Characteristics
CheckM Completeness 99.6%
CheckM Contamination 0.42%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 115
N50 Contigs 34,623 bp
Longest Contig 139,925 bp
Scaffold Count 115
N50 Scaffolds 34,623 bp
Longest Scaffold 139,925 bp
Genome Size 2,028,625 bp
Protein Count 2,075
Coding Density 86.05%
GC Percentage 39.64%
Ambiguous Bases N/A
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM23035v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470530
Country None
Date 2011-10-11
Genbank Assembly Accession GCA_000230355.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,194
Refseq Category na
Seq Rel Date 2011/10/11
Spanned Gaps 0
Species Taxid 1313
SSU Count 1
Submitter Université Laval
Taxid 1089299
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGID00000000.1