Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans; x__Streptococcus mutans TCI-228
NCBI Strain Identifiers TCI-228
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006739205.1)
Genome Characteristics
CheckM Completeness 99.95%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 0
23S Count 0
tRNA Count 17
Contig Count 109
N50 Contigs 41,003 bp
Longest Contig 109,711 bp
Scaffold Count 109
N50 Scaffolds 41,003 bp
Longest Scaffold 109,711 bp
Genome Size 1,859,995 bp
Protein Count 1,780
Coding Density 86.91%
GC Percentage 36.85%
Ambiguous Bases N/A
GTDB representative GCA_006739205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SMUT6-NEX_34-228
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436518
Country Brazil
Date 2011-10-06
Genbank Assembly Accession GCA_000229585.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source dental plaque
Latitude Longitude None
Molecule Count N/A
CDS Count 1,865
Refseq Category na
Seq Rel Date 2011/10/06
Spanned Gaps 0
Species Taxid 1309
SSU Count 0
Submitter JCVI
Taxid 1074166
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGLU00000000.1