Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sobrinus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sobrinus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sobrinus; x__Streptococcus sobrinus TCI-118
NCBI Strain Identifiers TCI-118
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000686605.1)
Genome Characteristics
CheckM Completeness 98.38%
CheckM Contamination 0.57%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 1
tRNA Count 16
Contig Count 224
N50 Contigs 23,590 bp
Longest Contig 120,832 bp
Scaffold Count 224
N50 Scaffolds 23,590 bp
Longest Scaffold 120,832 bp
Genome Size 2,107,227 bp
Protein Count 2,093
Coding Density 83.48%
GC Percentage 43.50%
Ambiguous Bases N/A
GTDB representative GCA_000686605.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SMUT4-NEX_6-118
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436543
Country Brazil
Date 2011-10-06
Genbank Assembly Accession GCA_000228545.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source dental plaque
Latitude Longitude None
Molecule Count N/A
CDS Count 2,103
Refseq Category na
Seq Rel Date 2011/10/06
Spanned Gaps 0
Species Taxid 1310
SSU Count 1
Submitter JCVI
Taxid 1074117
Total Gap Length 0
Translation Table 11
tRNA Count (total) 35
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGHN00000000.1