Cutibacterium avidum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium avidum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium avidum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Cutibacterium; s__Cutibacterium avidum; x__Cutibacterium avidum ATCC 25577
NCBI Strain Identifiers ATCC 25577
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (22 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 24
N50 Contigs 579,075 bp
Longest Contig 731,931 bp
Scaffold Count 7
N50 Scaffolds 2,542,712 bp
Longest Scaffold 2,542,712 bp
Genome Size 2,553,960 bp
Protein Count 2,305
Coding Density 89.11%
GC Percentage 63.42%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM22729v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02299449
Country None
Date 2011-10-4
Genbank Assembly Accession GCA_000227295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,295
Refseq Category na
Seq Rel Date 2011/10/04
Spanned Gaps 17
Species Taxid 33010
SSU Count 1
Submitter Baylor College of Medicine
Taxid 997355
Total Gap Length 20464
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AGBA00000000.1