Sphingomonas elodea
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas elodea
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas elodea
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Sphingomonas; s__Sphingomonas elodea; x__Sphingomonas elodea ATCC 31461
NCBI Strain Identifiers ATCC 31461
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 127
N50 Contigs 65,505 bp
Longest Contig 168,407 bp
Scaffold Count 127
N50 Scaffolds 65,505 bp
Longest Scaffold 168,407 bp
Genome Size 4,124,388 bp
Protein Count 3,866
Coding Density 90.81%
GC Percentage 67.36%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM22695v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470957
Country None
Date 2011-9-30
Genbank Assembly Accession GCA_000226955.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 3,828
Refseq Category na
Seq Rel Date 2011/09/30
Spanned Gaps 0
Species Taxid 179878
SSU Count 1
Submitter Shanghai Jiao Tong University
Taxid 1081640
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AGFU00000000.1