Borreliella afzelii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Spirochaetia; o__Borreliales; f__Borreliaceae; g__Borreliella; s__Borreliella afzelii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borreliella; s__Borreliella afzelii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borreliella; s__Borreliella afzelii; x__Borreliella afzelii PKo
NCBI Strain Identifiers PKo
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001900865.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 18
N50 Contigs 903,609 bp
Longest Contig 903,609 bp
Scaffold Count 18
N50 Scaffolds 903,609 bp
Longest Scaffold 903,609 bp
Genome Size 1,404,288 bp
Protein Count 1,392
Coding Density 87.56%
GC Percentage 27.90%
Ambiguous Bases N/A
GTDB representative GCA_001900865.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM22283v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02604205
Country None
Date 2011-08-05
Genbank Assembly Accession GCA_000222835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 18
CDS Count 1,409
Refseq Category na
Seq Rel Date 2011/08/05
Spanned Gaps 0
Species Taxid 29518
SSU Count 2
Submitter University of Maryland School of Medicine - Institute For Genome Sciences
Taxid 390236
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None