Vibrio ichthyoenteri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio ichthyoenteri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio ichthyoenteri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio ichthyoenteri; x__Vibrio ichthyoenteri ATCC 700023
NCBI Strain Identifiers ATCC 700023
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 0.42%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 4
23S Count 1
tRNA Count 20
Contig Count 326
N50 Contigs 45,976 bp
Longest Contig 108,694 bp
Scaffold Count 326
N50 Scaffolds 45,976 bp
Longest Scaffold 108,694 bp
Genome Size 4,641,086 bp
Protein Count 4,519
Coding Density 86.40%
GC Percentage 44.42%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM22260v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02951902
Country None
Date 2011-08-04
Genbank Assembly Accession GCA_000222605.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,361
Refseq Category na
Seq Rel Date 2011/08/04
Spanned Gaps 0
Species Taxid 142461
SSU Count 4
Submitter FDA
Taxid 870968
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AFWF00000000.1