Afipia clevelandensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Xanthobacteraceae; g__Afipia; s__Afipia clevelandensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; x__unclassified Bradyrhizobiaceae; s__Bradyrhizobiaceae bacterium SG-6C
NCBI Strain Identifiers SG-6C
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000336555.1)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 38
N50 Contigs 206,746 bp
Longest Contig 519,555 bp
Scaffold Count 1
N50 Scaffolds 4,336,393 bp
Longest Scaffold 4,336,393 bp
Genome Size 4,336,393 bp
Protein Count 4,129
Coding Density 88.25%
GC Percentage 61.86%
Ambiguous Bases 4
GTDB representative GCA_000336555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM21964v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469695
Country Australia: Canberra
Date 2011-7-1
Genbank Assembly Accession GCA_000219645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source insecticide contaminated soil
Latitude Longitude None
Molecule Count 1
CDS Count 4,127
Refseq Category na
Seq Rel Date 2011/07/01
Spanned Gaps 38
Species Taxid 709797
SSU Count 1
Submitter CSIRO Ecosystem Sciences, Black Mountain Laboratories, Acton, Australia
Taxid 709797
Total Gap Length 10477
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFOF00000000.1