Nitrosomonas sp000219585
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Nitrosomonadaceae; g__Nitrosomonas; s__Nitrosomonas sp000219585
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Nitrosomonadales; f__Nitrosomonadaceae; g__Nitrosomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Nitrosomonadales; f__Nitrosomonadaceae; g__Nitrosomonas; s__Nitrosomonas sp. Is79A3
NCBI Strain Identifiers Is79A3
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.2%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 3,783,444 bp
Longest Contig 3,783,444 bp
Scaffold Count 1
N50 Scaffolds 3,783,444 bp
Longest Scaffold 3,783,444 bp
Genome Size 3,783,444 bp
Protein Count 3,559
Coding Density 86.36%
GC Percentage 45.44%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM21958v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02232044
Country None
Date 2011-6-29
Genbank Assembly Accession GCA_000219585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source freshwater lake
Latitude Longitude None
Molecule Count 1
CDS Count 3,486
Refseq Category na
Seq Rel Date 2011/06/29
Spanned Gaps 0
Species Taxid 261292
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 261292
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None