Aliidiomarina sp000218785
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Aliidiomarina; s__Aliidiomarina sp000218785
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Idiomarinaceae; g__Idiomarina; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Idiomarinaceae; g__Idiomarina; s__Idiomarina sp. A28L
NCBI Strain Identifiers A28L
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.88%
CheckM Contamination 0.51%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 28
N50 Contigs 230,133 bp
Longest Contig 394,143 bp
Scaffold Count 28
N50 Scaffolds 230,133 bp
Longest Scaffold 394,143 bp
Genome Size 2,591,567 bp
Protein Count 2,308
Coding Density 90.95%
GC Percentage 45.50%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name A28LD_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469973
Country India: Pangong Lake
Date 2011-6-16
Genbank Assembly Accession GCA_000218785.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,295
Refseq Category na
Seq Rel Date 2011/06/16
Spanned Gaps 0
Species Taxid 1036674
SSU Count 2
Submitter Institute of Genomics and Integrative Biology
Taxid 1036674
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFPO00000000.1