Leptospira santarosai
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira santarosai; x__Leptospira santarosai str. 2000030832
NCBI Strain Identifiers 2000030832
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000313175.2)
Genome Characteristics
CheckM Completeness 97.65%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 45
N50 Contigs 292,098 bp
Longest Contig 418,293 bp
Scaffold Count 45
N50 Scaffolds 292,098 bp
Longest Scaffold 418,293 bp
Genome Size 3,996,157 bp
Protein Count 3,627
Coding Density 84.76%
GC Percentage 41.76%
Ambiguous Bases 3
GTDB representative GCA_000313175.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name gls454040v2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436630
Country USA
Date 2013-03-15
Genbank Assembly Accession GCA_000217455.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,939
Refseq Category na
Seq Rel Date 2013/03/15
Spanned Gaps 0
Species Taxid 28183
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 996805
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFJN00000000.2