Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Copenhageni; x__Leptospira interrogans serovar Copenhageni str. Fiocruz LV251
NCBI Strain Identifiers Fiocruz LV251
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 169
N50 Contigs 44,504 bp
Longest Contig 173,551 bp
Scaffold Count 169
N50 Scaffolds 44,504 bp
Longest Scaffold 173,551 bp
Genome Size 4,626,945 bp
Protein Count 3,729
Coding Density 75.54%
GC Percentage 34.99%
Ambiguous Bases N/A
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CA_glsol085
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00254380
Country Brazil: Salvador
Date 2013-05-17
Genbank Assembly Accession GCA_000217295.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,116
Refseq Category na
Seq Rel Date 2013/05/17
Spanned Gaps 0
Species Taxid 173
SSU Count 3
Submitter J. Craig Venter Institute
Taxid 996817
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFJV00000000.2