Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Copenhageni; x__Leptospira interrogans serovar Copenhageni str. Fiocruz LV2767
NCBI Strain Identifiers Fiocruz LV2767
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 283
N50 Contigs 32,925 bp
Longest Contig 114,658 bp
Scaffold Count 257
N50 Scaffolds 38,517 bp
Longest Scaffold 114,658 bp
Genome Size 4,552,421 bp
Protein Count 3,661
Coding Density 75.95%
GC Percentage 34.97%
Ambiguous Bases 323
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name CLC_glsol109
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00254330
Country Brazil: Salvador
Date 2011-06-07
Genbank Assembly Accession GCA_000217195.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,950
Refseq Category na
Seq Rel Date 2011/06/07
Spanned Gaps 26
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 996825
Total Gap Length 369
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFKD00000000.1