Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans str. C10069
NCBI Strain Identifiers C10069
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 43
N50 Contigs 250,073 bp
Longest Contig 790,562 bp
Scaffold Count 43
N50 Scaffolds 250,073 bp
Longest Scaffold 790,562 bp
Genome Size 4,741,083 bp
Protein Count 3,861
Coding Density 75.52%
GC Percentage 35.06%
Ambiguous Bases 2
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name gls454077v2.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436629
Country Thailand
Date 2012-10-23
Genbank Assembly Accession GCA_000216235.3
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,257
Refseq Category na
Seq Rel Date 2012/10/23
Spanned Gaps 0
Species Taxid 173
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 1001591
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFLZ00000000.2