Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa HB13
NCBI Strain Identifiers 138244
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 23
N50 Contigs 696,624 bp
Longest Contig 1,412,346 bp
Scaffold Count 23
N50 Scaffolds 696,624 bp
Longest Scaffold 1,412,346 bp
Genome Size 6,529,310 bp
Protein Count 6,093
Coding Density 89.69%
GC Percentage 66.23%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name PA13_miseq
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471892
Country None
Date 2013-8-30
Genbank Assembly Accession GCA_000215775.5
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,270
Refseq Category na
Seq Rel Date 2013/08/30
Spanned Gaps 0
Species Taxid 287
SSU Count 3
Submitter University of Minho
Taxid 983918
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEVV00000000.3