Treponema_E primitia
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Spirochaetia; o__Treponematales; f__Treponemataceae_B; g__Treponema_E; s__Treponema_E primitia
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Spirochaetaceae; g__Treponema; s__Treponema primitia
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Spirochaetaceae; g__Treponema; s__Treponema primitia; x__Treponema primitia ZAS-2
NCBI Strain Identifiers ZAS-2
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.86%
CheckM Contamination 1.14%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 4,059,867 bp
Longest Contig 4,059,867 bp
Scaffold Count 1
N50 Scaffolds 4,059,867 bp
Longest Scaffold 4,059,867 bp
Genome Size 4,059,867 bp
Protein Count 3,500
Coding Density 91.75%
GC Percentage 50.84%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM21437v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603452
Country None
Date 2011-5-23
Genbank Assembly Accession GCA_000214375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 3,498
Refseq Category representative genome
Seq Rel Date 2011/05/23
Spanned Gaps 0
Species Taxid 88058
SSU Count 2
Submitter J. Craig Venter Institute
Taxid 545694
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None