Kocuria rhizophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Kocuria; s__Kocuria rhizophila
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Kocuria; s__Kocuria rhizophila
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Kocuria; s__Kocuria rhizophila; x__Kocuria rhizophila P7-4
NCBI Strain Identifiers P7-4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003667225.1)
Genome Characteristics
CheckM Completeness 98.68%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 54
N50 Contigs 266,116 bp
Longest Contig 461,292 bp
Scaffold Count 54
N50 Scaffolds 266,116 bp
Longest Scaffold 461,292 bp
Genome Size 2,820,331 bp
Protein Count 2,462
Coding Density 88.60%
GC Percentage 70.53%
Ambiguous Bases N/A
GTDB representative GCA_003667225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM21411v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470195
Country None
Date 2011-05-19
Genbank Assembly Accession GCA_000214115.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,445
Refseq Category na
Seq Rel Date 2011/05/19
Spanned Gaps 0
Species Taxid 72000
SSU Count 1
Submitter Genome Resource Center
Taxid 1029824
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFID00000000.1