Streptococcus sanguinis_C
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sanguinis_C
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sanguinis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sanguinis; x__Streptococcus sanguinis SK49
NCBI Strain Identifiers SK49
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 21
N50 Contigs 145,325 bp
Longest Contig 468,288 bp
Scaffold Count 5
N50 Scaffolds 1,587,415 bp
Longest Scaffold 1,587,415 bp
Genome Size 2,279,404 bp
Protein Count 2,218
Coding Density 88.49%
GC Percentage 42.95%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM21281v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00253323
Country None
Date 2011-5-11
Genbank Assembly Accession GCA_000212815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 2,248
Refseq Category na
Seq Rel Date 2011/05/11
Spanned Gaps 16
Species Taxid 1305
SSU Count 1
Submitter Baylor College of Medicine
Taxid 888808
Total Gap Length 19322
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AFFO00000000.1