Alicycliphilus denitrificans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Alicycliphilus; s__Alicycliphilus denitrificans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Alicycliphilus; s__Alicycliphilus denitrificans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Alicycliphilus; s__Alicycliphilus denitrificans; x__Alicycliphilus denitrificans K601
NCBI Strain Identifiers K601
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.46%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 2
N50 Contigs 4,995,263 bp
Longest Contig 4,995,263 bp
Scaffold Count 2
N50 Scaffolds 4,995,263 bp
Longest Scaffold 4,995,263 bp
Genome Size 5,070,751 bp
Protein Count 4,797
Coding Density 91.06%
GC Percentage 67.90%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM20464v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00713606
Country Germany
Date 2011-4-19
Genbank Assembly Accession GCA_000204645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source anaerobic sewer sludge
Latitude Longitude None
Molecule Count 2
CDS Count 4,820
Refseq Category representative genome
Seq Rel Date 2011/04/19
Spanned Gaps 0
Species Taxid 179636
SSU Count 3
Submitter US DOE Joint Genome Institute
Taxid 596154
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None