Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhi; x__Salmonella enterica subsp. enterica serovar Typhi str. CT18
NCBI Strain Identifiers CT18
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 3
N50 Contigs 4,809,037 bp
Longest Contig 4,809,037 bp
Scaffold Count 3
N50 Scaffolds 4,809,037 bp
Longest Scaffold 4,809,037 bp
Genome Size 5,133,713 bp
Protein Count 5,065
Coding Density 86.73%
GC Percentage 51.87%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM19599v1
Assembly Type n/a
Bioproject PRJNA57793
Biosample SAMEA1705914
Country None
Date 2003-5-6
Genbank Assembly Accession GCA_000195995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
CDS Count 4,474
Refseq Category reference genome
Seq Rel Date 2003/05/06
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter Sanger Institute
Taxid 220341
Total Gap Length 0
Translation Table 11
tRNA Count (total) 80
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None