Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes; x__Listeria monocytogenes J1-220
NCBI Strain Identifiers J1-220
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 7
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 3,032,269 bp
Longest Contig 3,032,269 bp
Scaffold Count 1
N50 Scaffolds 3,032,269 bp
Longest Scaffold 3,032,269 bp
Genome Size 3,032,269 bp
Protein Count 2,977
Coding Density 89.31%
GC Percentage 37.94%
Ambiguous Bases N/A
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM19539v5
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01816124
Country USA:missing
Date 2017-10-23
Genbank Assembly Accession GCA_000195395.5
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source clinical
Latitude Longitude None
Molecule Count 1
CDS Count 3,016
Refseq Category na
Seq Rel Date 2017/10/23
Spanned Gaps 0
Species Taxid 1639
SSU Count 6
Submitter FDA
Taxid 930782
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None