Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__Rhizobium phaseoli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__Rhizobium etli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium etli; x__Rhizobium etli CNPAF512
NCBI Strain Identifiers CNPAF512
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003985125.1)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 0
tRNA Count 19
Contig Count 402
N50 Contigs 37,079 bp
Longest Contig 134,442 bp
Scaffold Count 402
N50 Scaffolds 37,079 bp
Longest Scaffold 134,442 bp
Genome Size 6,726,123 bp
Protein Count 6,497
Coding Density 87.32%
GC Percentage 61.34%
Ambiguous Bases N/A
GTDB representative GCA_003985125.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name RhECNPAF512_1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469445
Country Brazil
Date 2011-03-29
Genbank Assembly Accession GCA_000194195.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bean nodules
Latitude Longitude None
Molecule Count N/A
CDS Count 6,608
Refseq Category na
Seq Rel Date 2011/03/29
Spanned Gaps 0
Species Taxid 29449
SSU Count 1
Submitter CMPG, Katholieke Universiteit, Leuven
Taxid 993047
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEYZ00000000.1