Cellulophaga lytica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Cellulophaga; s__Cellulophaga lytica
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Cellulophaga; s__Cellulophaga lytica
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Cellulophaga; s__Cellulophaga lytica; x__Cellulophaga lytica DSM 7489
NCBI Strain Identifiers DSM 7489
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 3,765,936 bp
Longest Contig 3,765,936 bp
Scaffold Count 1
N50 Scaffolds 3,765,936 bp
Longest Scaffold 3,765,936 bp
Genome Size 3,765,936 bp
Protein Count 3,303
Coding Density 91.30%
GC Percentage 32.11%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM19059v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00713590
Country Costa Rica
Date 2011-2-28
Genbank Assembly Accession GCA_000190595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source beach mud
Latitude Longitude 10.131928 N 83.518524 W
Molecule Count 1
CDS Count 3,268
Refseq Category representative genome
Seq Rel Date 2011/02/28
Spanned Gaps 0
Species Taxid 979
SSU Count 4
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 867900
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None