Methanobrevibacter_A smithii_A
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Methanobacteriota; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobrevibacter_A; s__Methanobrevibacter_A smithii_A
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobrevibacter; s__Methanobrevibacter smithii
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Methanomada group; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobrevibacter; s__Methanobrevibacter smithii; x__Methanobrevibacter smithii TS96A
NCBI Strain Identifiers TS96A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002252585.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 47
N50 Contigs 98,370 bp
Longest Contig 186,572 bp
Scaffold Count 47
N50 Scaffolds 98,370 bp
Longest Scaffold 186,572 bp
Genome Size 1,975,004 bp
Protein Count 1,859
Coding Density 90.04%
GC Percentage 30.28%
Ambiguous Bases N/A
GTDB representative GCA_002252585.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM19013v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436671
Country None
Date 2011-02-17
Genbank Assembly Accession GCA_000190135.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,827
Refseq Category na
Seq Rel Date 2011/02/17
Spanned Gaps 0
Species Taxid 2173
SSU Count 2
Submitter Washington University in St.Louis
Taxid 911133
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEMB00000000.1