Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Montevideo; x__Salmonella enterica subsp. enterica serovar Montevideo str. 556152
NCBI Strain Identifiers FDA_2010_219_Red Pepper-1;556152
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.79%
CheckM Contamination 0.35%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 173
N50 Contigs 71,005 bp
Longest Contig 510,589 bp
Scaffold Count 173
N50 Scaffolds 71,005 bp
Longest Scaffold 510,589 bp
Genome Size 4,635,895 bp
Protein Count 4,486
Coding Density 87.66%
GC Percentage 52.17%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM18897v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00710609
Country None
Date 2011-02-10
Genbank Assembly Accession GCA_000188975.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Red Pepper Flakes
Latitude Longitude None
Molecule Count N/A
CDS Count 4,539
Refseq Category na
Seq Rel Date 2011/02/10
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 871586
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AETJ00000000.1