Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Montevideo; x__Salmonella enterica subsp. enterica serovar Montevideo str. 609460
NCBI Strain Identifiers 609460;FDA_2010_216_Black Pepper-2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.71%
CheckM Contamination 0.51%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 3
tRNA Count 18
Contig Count 95
N50 Contigs 98,015 bp
Longest Contig 374,364 bp
Scaffold Count 95
N50 Scaffolds 98,015 bp
Longest Scaffold 374,364 bp
Genome Size 4,645,673 bp
Protein Count 4,387
Coding Density 87.77%
GC Percentage 52.18%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM18893v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00710607
Country None
Date 2011-02-10
Genbank Assembly Accession GCA_000188935.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,498
Refseq Category na
Seq Rel Date 2011/02/10
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 859198
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AETH00000000.1