Pauljensenia hongkongensis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Actinomycetaceae; g__Pauljensenia; s__Pauljensenia hongkongensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces sp. oral taxon 178; x__Actinomyces sp. oral taxon 178 str. F0338
NCBI Strain Identifiers F0338
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001746855.1)
Genome Characteristics
CheckM Completeness 91.44%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 340
N50 Contigs 15,263 bp
Longest Contig 80,915 bp
Scaffold Count 43
N50 Scaffolds 2,137,113 bp
Longest Scaffold 2,137,113 bp
Genome Size 2,817,106 bp
Protein Count 2,441
Coding Density 81.31%
GC Percentage 70.64%
Ambiguous Bases N/A
GTDB representative GCA_001746855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM18668v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00210764
Country None
Date 2011-1-26
Genbank Assembly Accession GCA_000186685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 2,348
Refseq Category na
Seq Rel Date 2011/01/26
Spanned Gaps 297
Species Taxid 710238
SSU Count 1
Submitter Baylor College of Medicine
Taxid 888051
Total Gap Length 83799
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEUH00000000.1