Streptococcus agalactiae
Isolate HQ 5S/16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae; x__Streptococcus agalactiae ATCC 13813
NCBI Strain Identifiers ATCC 13813
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1,185 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 13
Contig Count 134
N50 Contigs 31,548 bp
Longest Contig 78,279 bp
Scaffold Count 21
N50 Scaffolds 2,243,750 bp
Longest Scaffold 2,243,750 bp
Genome Size 2,287,892 bp
Protein Count 2,127
Coding Density 81.54%
GC Percentage 35.26%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM18644v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00217013
Country None
Date 2011-1-26
Genbank Assembly Accession GCA_000186445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 2,178
Refseq Category na
Seq Rel Date 2011/01/26
Spanned Gaps 113
Species Taxid 1311
SSU Count 1
Submitter Baylor College of Medicine
Taxid 888745
Total Gap Length 172934
Translation Table 11
tRNA Count (total) 22
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AEQQ00000000.1