Streptococcus oralis_BC
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus oralis_BC
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus oralis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus oralis; x__Streptococcus oralis ATCC 49296
NCBI Strain Identifiers ATCC 49296
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003942675.1)
Genome Characteristics
CheckM Completeness 99.6%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 17
N50 Contigs 179,388 bp
Longest Contig 789,020 bp
Scaffold Count 5
N50 Scaffolds 2,061,353 bp
Longest Scaffold 2,061,353 bp
Genome Size 2,068,336 bp
Protein Count 1,967
Coding Density 89.75%
GC Percentage 41.13%
Ambiguous Bases N/A
GTDB representative GCA_003942675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM18526v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00260261
Country None
Date 2011-1-12
Genbank Assembly Accession GCA_000185265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 2,000
Refseq Category na
Seq Rel Date 2011/01/12
Spanned Gaps 12
Species Taxid 1303
SSU Count 1
Submitter Baylor College of Medicine
Taxid 888049
Total Gap Length 14636
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEPO00000000.1