Marivirga tractuosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Cytophagales; f__Cyclobacteriaceae; g__Marivirga; s__Marivirga tractuosa
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Cytophagia; o__Cytophagales; f__Flammeovirgaceae; g__Marivirga; s__Marivirga tractuosa
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Cytophagia; o__Cytophagales; f__Flammeovirgaceae; g__Marivirga; s__Marivirga tractuosa; x__Marivirga tractuosa DSM 4126
NCBI Strain Identifiers DSM 4126
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 2
N50 Contigs 4,511,574 bp
Longest Contig 4,511,574 bp
Scaffold Count 2
N50 Scaffolds 4,511,574 bp
Longest Scaffold 4,511,574 bp
Genome Size 4,516,490 bp
Protein Count 3,810
Coding Density 89.66%
GC Percentage 35.52%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM18342v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00138949
Country Viet Nam: Nha Trang
Date 2010-11-30
Genbank Assembly Accession GCA_000183425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source beach sand
Latitude Longitude 12.250 N 109.199 E
Molecule Count 2
CDS Count 3,765
Refseq Category representative genome
Seq Rel Date 2010/11/30
Spanned Gaps 0
Species Taxid 1006
SSU Count 2
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 643867
Total Gap Length 0
Translation Table 11
tRNA Count (total) 39
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None