Clostridium butyricum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum; x__Clostridium butyricum E4 str. BoNT E BL5262
NCBI Strain Identifiers BoNT E BL5262
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742065.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 13
16S Count 14
23S Count 17
tRNA Count 20
Contig Count 13
N50 Contigs 757,653 bp
Longest Contig 2,252,949 bp
Scaffold Count 13
N50 Scaffolds 757,653 bp
Longest Scaffold 2,252,949 bp
Genome Size 4,758,422 bp
Protein Count 4,240
Coding Density 84.18%
GC Percentage 28.70%
Ambiguous Bases N/A
GTDB representative GCA_006742065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM18260v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470281
Country None
Date 2009-05-15
Genbank Assembly Accession GCA_000182605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 4,168
Refseq Category na
Seq Rel Date 2009/05/15
Spanned Gaps 0
Species Taxid 1492
SSU Count 15
Submitter J. Craig Venter Institute
Taxid 632245
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ACOM00000000.1