Burkholderia ambifaria
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia ambifaria
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia ambifaria
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia ambifaria; x__Burkholderia ambifaria IOP40-10
NCBI Strain Identifiers IOP40-10
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000203915.1)
Genome Characteristics
CheckM Completeness 98.92%
CheckM Contamination 1.21%
CheckM Strain Heterogeneity 12.5
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 629
N50 Contigs 24,355 bp
Longest Contig 254,893 bp
Scaffold Count 629
N50 Scaffolds 24,355 bp
Longest Scaffold 254,893 bp
Genome Size 7,689,995 bp
Protein Count 7,215
Coding Density 86.22%
GC Percentage 66.34%
Ambiguous Bases N/A
GTDB representative GCA_000203915.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM18197v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00000046
Country None
Date 2008-03-17
Genbank Assembly Accession GCA_000181975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,360
Refseq Category na
Seq Rel Date 2008/03/17
Spanned Gaps 0
Species Taxid 152480
SSU Count 1
Submitter US DOE Joint Genome Institute (JGI-PGF)
Taxid 396596
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABLC00000000.1