Borreliella burgdorferi
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Spirochaetia; o__Borreliales; f__Borreliaceae; g__Borreliella; s__Borreliella burgdorferi
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borreliella; s__Borreliella burgdorferi
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borreliella; s__Borreliella burgdorferi; x__Borreliella burgdorferi 94a
NCBI Strain Identifiers 94a
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008685.2)
Genome Characteristics
CheckM Completeness 99.6%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 100.0
5S Count 2
16S Count 2
23S Count 4
tRNA Count 18
Contig Count 25
N50 Contigs 169,491 bp
Longest Contig 216,266 bp
Scaffold Count 25
N50 Scaffolds 169,491 bp
Longest Scaffold 216,266 bp
Genome Size 1,295,451 bp
Protein Count 1,261
Coding Density 88.07%
GC Percentage 28.26%
Ambiguous Bases 1
GTDB representative GCA_000008685.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM18171v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02436324
Country None
Date 2009-03-23
Genbank Assembly Accession GCA_000181715.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 14
CDS Count 1,301
Refseq Category na
Seq Rel Date 2009/03/23
Spanned Gaps 0
Species Taxid 139
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 476212
Total Gap Length 0
Translation Table 11
tRNA Count (total) 29
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ABGK00000000.2