Streptococcus pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pneumoniae; x__Streptococcus pneumoniae SPN061370
NCBI Strain Identifiers SPN061370
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457635.1)
Genome Characteristics
CheckM Completeness 99.6%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 5
23S Count 8
tRNA Count 20
Contig Count 37
N50 Contigs 131,229 bp
Longest Contig 378,541 bp
Scaffold Count 37
N50 Scaffolds 131,229 bp
Longest Scaffold 378,541 bp
Genome Size 2,136,756 bp
Protein Count 2,160
Coding Density 85.11%
GC Percentage 39.62%
Ambiguous Bases 9
GTDB representative GCA_001457635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM18057v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138309
Country None
Date 2010-08-04
Genbank Assembly Accession GCA_000180575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,267
Refseq Category na
Seq Rel Date 2010/08/04
Spanned Gaps 0
Species Taxid 1313
SSU Count 5
Submitter The Wellcome Trust Sanger Institute
Taxid 869801
Total Gap Length 0
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CACJ00000000.1