Veillonella atypica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_C; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella atypica
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella atypica
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella atypica; x__Veillonella atypica ACS-134-V-Col7a
NCBI Strain Identifiers ACS-134-V-Col7a
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002959915.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 4
tRNA Count 20
Contig Count 70
N50 Contigs 74,331 bp
Longest Contig 211,332 bp
Scaffold Count 70
N50 Scaffolds 74,331 bp
Longest Scaffold 211,332 bp
Genome Size 2,151,913 bp
Protein Count 1,923
Coding Density 88.76%
GC Percentage 38.98%
Ambiguous Bases N/A
GTDB representative GCA_002959915.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17975v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00100747
Country None
Date 2010-08-10
Genbank Assembly Accession GCA_000179755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biological product [ENVO:02000043]
Latitude Longitude None
Molecule Count N/A
CDS Count 1,916
Refseq Category na
Seq Rel Date 2010/08/10
Spanned Gaps 0
Species Taxid 39777
SSU Count 1
Submitter J. Craig Venter Institute
Taxid 866778
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEDS00000000.1