Limosilactobacillus reuteri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Limosilactobacillus; s__Limosilactobacillus reuteri
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus reuteri
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus reuteri; x__Lactobacillus reuteri lpuph
NCBI Strain Identifiers lpuph
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000016825.1)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.79%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 127
N50 Contigs 45,617 bp
Longest Contig 126,890 bp
Scaffold Count 127
N50 Scaffolds 45,617 bp
Longest Scaffold 126,890 bp
Genome Size 2,116,621 bp
Protein Count 2,067
Coding Density 88.14%
GC Percentage 38.39%
Ambiguous Bases 4
GTDB representative GCA_000016825.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM17945v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471904
Country None
Date 2010-07-13
Genbank Assembly Accession GCA_000179455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,025
Refseq Category na
Seq Rel Date 2010/07/13
Spanned Gaps 0
Species Taxid 1598
SSU Count 4
Submitter Department of Food Science and Technology, Univ. Nebraska Lincoln
Taxid 863368
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AEAX00000000.1